Circulating messenger RNA profiling with microarray and next-generation sequencing: cross-platform comparison

CL Shih, JD Luo, JWC Chang, TL Chen… - Cancer Genomics & …, 2015 - cgp.iiarjournals.org
Background: Circulating mRNA is a less invasive and more easily accessed source of
samples for biomedical research and clinical applications. However, it is of poor quality. We …

Direct screening of plasma circulating microRNAs

P Songia, M Chiesa, V Valerio, D Moschetta… - RNA biology, 2018 - Taylor & Francis
Circulating microRNAs (miRNAs) are considered as reliable candidates for biomarker
discovery. RNA-Sequencing has become the most suitable technique to accurately quantify …

[HTML][HTML] Profiling the circulating mRNA transcriptome in human liver disease

A Sayeed, BE Dalvano, DE Kaplan, U Viswanathan… - Oncotarget, 2020 - ncbi.nlm.nih.gov
The human circulation contains cell-free DNA and non-coding microRNA (miRNA). Less is
known about the presence of messenger RNA (mRNA). This report profiles the human …

[HTML][HTML] Clinical verification of plasma messenger RNA as novel noninvasive biomarker identified through bioinformatics analysis for lung cancer

D Zhou, W Tang, X Liu, HX An, Y Zhang - Oncotarget, 2017 - ncbi.nlm.nih.gov
Lung cancer (LC) remains associated with significant mortality worldwide. The lack of
reliable noninvasive biomarkers and targeted therapies contributes to poor survival rate …

[HTML][HTML] Single-cell RNA sequencing for the identification of early-stage lung cancer biomarkers from circulating blood

J Kim, Z Xu, PA Marignani - NPJ Genomic Medicine, 2021 - nature.com
Lung cancer accounts for more than half of the new cancers diagnosed world-wide with poor
survival rates. Despite the development of chemical, radiological, and immunotherapies …

[HTML][HTML] A Cross-Comparison of High-Throughput Platforms for Circulating MicroRNA Quantification, Agreement in Risk Classification, and Biomarker Discovery in …

C Gargiuli, L De Cecco, A Mariancini, MF Iannò… - Frontiers in …, 2022 - frontiersin.org
Background Circulating microRNAs (ct-miRs) are promising cancer biomarkers. This study
focuses on platform comparison to assess performance variability, agreement in the …

Transcriptomics today: Microarrays, RNA-seq, and more

C Tachibana - Science, 2015 - science.org
Gene expression analysis has become routine, thanks to microarrays and now RNA
sequencing, which is helping researchers discover novel RNA forms and variants. New …

Dynamic and static circulating cancer microRNA biomarkers–a validation study

M Abu-Halima, A Keller, LS Becker, U Fischer… - RNA biology, 2023 - Taylor & Francis
For cancers and other pathologies, early diagnosis remains the most promising path to
survival. Profiling of longitudinal cohorts facilitates insights into trajectories of biomarkers …

Plasma RNA sequencing of extracellular RNAs reveals potential biomarkers for non-small cell lung cancer

L Wang, J Wang, E Jia, Z Liu, Q Ge, X Zhao - Clinical Biochemistry, 2020 - Elsevier
Background Lung cancer is one of the most common malignancies, and it has extremely
high incidence and mortality rates. Although there have been many studies focused on lung …

The circulating transcriptome as a source of non‐invasive cancer biomarkers: concepts and controversies of non‐coding and coding RNA in body fluids

M Fernandez‐Mercado, L Manterola… - Journal of cellular …, 2015 - Wiley Online Library
The gold standard for cancer diagnosis remains the histological examination of affected
tissue, obtained either by surgical excision, or radiologically guided biopsy. Such …