Deleterious variants in TRAK1 disrupt mitochondrial movement and cause fatal encephalopathy

Brain. 2017 Mar 1;140(3):568-581. doi: 10.1093/brain/awx002.

Abstract

Cellular distribution and dynamics of mitochondria are regulated by several motor proteins and a microtubule network. In neurons, mitochondrial trafficking is crucial because of high energy needs and calcium ion buffering along axons to synapses during neurotransmission. The trafficking kinesin proteins (TRAKs) are well characterized for their role in lysosomal and mitochondrial trafficking in cells, especially neurons. Using whole exome sequencing, we identified homozygous truncating variants in TRAK1 (NM_001042646:c.287-2A > C), in six lethal encephalopathic patients from three unrelated families. The pathogenic variant results in aberrant splicing and significantly reduced gene expression at the RNA and protein levels. In comparison with normal cells, TRAK1-deficient fibroblasts showed irregular mitochondrial distribution, altered mitochondrial motility, reduced mitochondrial membrane potential, and diminished mitochondrial respiration. This study confirms the role of TRAK1 in mitochondrial dynamics and constitutes the first report of this gene in association with a severe neurodevelopmental disorder.

Keywords: TRAK1; early-onset epilepsy; mitochondria transport; neurodegeneration; rare diseases.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Vesicular Transport / genetics*
  • Adaptor Proteins, Vesicular Transport / metabolism*
  • Brain Diseases / diagnostic imaging
  • Brain Diseases / genetics*
  • Brain Diseases / mortality
  • Brain Diseases / pathology*
  • Cells, Cultured
  • Child, Preschool
  • Consanguinity
  • Family Health
  • Female
  • Fibroblasts / pathology
  • Fibroblasts / ultrastructure
  • Genetic Association Studies
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • Humans
  • Infant
  • Magnetic Resonance Imaging
  • Male
  • Mitochondria / metabolism*
  • Mitochondrial Dynamics / genetics*
  • Oxygen Consumption / genetics
  • Protein Transport / genetics
  • Transfection

Substances

  • Adaptor Proteins, Vesicular Transport
  • TRAK1 protein, human
  • Green Fluorescent Proteins